{
  "_id": "6ad9b8b3db07788da70a9f86",
  "Package": "epocakir",
  "Title": "Clinical Coding of Patients with Kidney Disease",
  "Version": "1.0.0",
  "Authors@R": "c(person(given = \"Alwin\",\nfamily = \"Wang\",\nrole = c(\"aut\", \"cre\"),\nemail = \"alwin.wang@austin.org.au\",\ncomment = c(ORCID = \"0000-0003-4883-2917\")),\nperson(given = \"Lisa\",\nfamily = \"Toh\",\nrole = \"aut\",\nemail = \"lisa.toh2@austin.org.au\",\ncomment = c(ORCID = \"0000-0002-5994-3666\")),\nperson(given = \"Davis\",\nfamily = \"Vaughan\",\nrole = \"ctb\",\nemail = \"davis@rstudio.com\"),\nperson(given = \"Olivier\",\nfamily = \"Roy\",\nrole = \"ctb\"),\nperson(given = \"Inaki\",\nfamily = \"Ucar\",\nrole = \"ctb\"))",
  "Description": "Clinical coding and diagnosis of patients with kidney\nusing clinical practice guidelines. The guidelines used are the\nevidence-based KDIGO guidelines, see\n<https://kdigo.org/guidelines/> for more information. This\npackage covers acute kidney injury (AKI), anemia, and chronic\nkidney disease (CKD).",
  "License": "MIT + file LICENSE",
  "URL": "https://github.com/alwinw/epocakir,\nhttps://alwinw.github.io/epocakir/",
  "BugReports": "https://github.com/alwinw/epocakir/issues",
  "Encoding": "UTF-8",
  "LazyData": "true",
  "Roxygen": "list(markdown = TRUE)",
  "RoxygenNote": "7.3.3",
  "VignetteBuilder": "knitr",
  "Language": "en-US",
  "Config/testthat/edition": "3",
  "Repository": "https://alwinw.r-universe.dev",
  "Date/Publication": "2025-11-02 23:32:33 UTC",
  "RemoteUrl": "https://github.com/alwinw/epocakir",
  "RemoteRef": "HEAD",
  "RemoteSha": "45377a58e1b05ed84734262eee1b3219d408dfab",
  "NeedsCompilation": "no",
  "Packaged": {
    "Date": "2026-10-22 07:14:02 UTC",
    "User": "root"
  },
  "Author": "Alwin Wang [aut, cre] (ORCID: <https://orcid.org/0000-0003-4883-2917>),\nLisa Toh [aut] (ORCID: <https://orcid.org/0000-0002-5994-3666>),\nDavis Vaughan [ctb],\nOlivier Roy [ctb],\nInaki Ucar [ctb]",
  "Maintainer": "Alwin Wang <alwin.wang@austin.org.au>",
  "_user": "alwinw",
  "_type": "src",
  "_file": "epocakir_1.0.0.tar.gz",
  "_fileid": "https://r2.ropensci.org/227d3d4ffe962609a0a0412c191dfc72295f6db153d9b45fd079d255e5866a0f",
  "_filesize": 191290,
  "_sha256": "227d3d4ffe962609a0a0412c191dfc72295f6db153d9b45fd079d255e5866a0f",
  "_expires": "2027-01-30T07:18:09.000Z",
  "_created": "2026-10-22T07:14:02.000Z",
  "_published": "2026-10-22T07:18:11.154Z",
  "_upstream": "https://github.com/alwinw/epocakir",
  "_status": "success",
  "_maintainer": {
    "name": "Alwin Wang",
    "email": "alwin.wang@austin.org.au",
    "orcid": "0000-0003-4883-2917"
  },
  "_jobs": [
    {
      "job": 119691768114,
      "time": 113,
      "config": "linux-devel-x86_64",
      "r": "4.7.0",
      "check": "OK",
      "artifact": "12409020135"
    },
    {
      "job": 119691768094,
      "time": 123,
      "config": "linux-release-x86_64",
      "r": "4.6.1",
      "check": "OK",
      "artifact": "12408054215"
    },
    {
      "job": 119691768044,
      "time": 211,
      "config": "macos-oldrel-arm64",
      "r": "4.5.3",
      "check": "OK",
      "artifact": "12408935650"
    },
    {
      "job": 119691768098,
      "time": 210,
      "config": "macos-release-arm64",
      "r": "4.6.1",
      "check": "OK",
      "artifact": "12408985763"
    },
    {
      "job": 119690705339,
      "time": 174,
      "config": "source",
      "r": "4.6.1",
      "check": "OK",
      "artifact": "12407819979"
    },
    {
      "job": 119691768359,
      "time": 140,
      "config": "wasm-release",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "12407734285"
    },
    {
      "job": 119691768439,
      "time": 83,
      "config": "windows-devel-x86_64",
      "r": "4.7.0",
      "check": "OK",
      "artifact": "12408073645"
    },
    {
      "job": 119691768265,
      "time": 92,
      "config": "windows-oldrel-x86_64",
      "r": "4.5.3",
      "check": "OK",
      "artifact": "12407768987"
    },
    {
      "job": 119691768077,
      "time": 91,
      "config": "windows-release-x86_64",
      "r": "4.6.1",
      "check": "OK",
      "artifact": "12408890611"
    }
  ],
  "_buildurl": "https://github.com/r-universe/alwinw/actions/runs/39738752905",
  "_commit": {
    "id": "45377a58e1b05ed84734262eee1b3219d408dfab",
    "author": "alwinw <16846521+alwinw@users.noreply.github.com>",
    "committer": "alwinw <16846521+alwinw@users.noreply.github.com>",
    "message": "docs(README): update badges\n",
    "time": 1762126353
  },
  "_distro": "resolute",
  "_host": "GitHub-Actions",
  "_registered": true,
  "_dependencies": [
    {
      "package": "R",
      "version": ">= 3.5.0",
      "role": "Depends"
    },
    {
      "package": "dplyr",
      "version": ">= 1.0.1",
      "role": "Imports"
    },
    {
      "package": "tidyr",
      "version": ">= 1.1.1",
      "role": "Imports"
    },
    {
      "package": "tibble",
      "version": ">= 3.0.1",
      "role": "Imports"
    },
    {
      "package": "rlang",
      "version": ">= 1.0.0",
      "role": "Imports"
    },
    {
      "package": "units",
      "version": ">= 0.7",
      "role": "Imports"
    },
    {
      "package": "lubridate",
      "version": ">= 1.7.0",
      "role": "Imports"
    },
    {
      "package": "magrittr",
      "version": ">= 2.0.1",
      "role": "Imports"
    },
    {
      "package": "testthat",
      "version": ">= 3.0.0",
      "role": "Suggests"
    },
    {
      "package": "knitr",
      "role": "Suggests"
    },
    {
      "package": "rmarkdown",
      "role": "Suggests"
    },
    {
      "package": "vctrs",
      "role": "Suggests"
    }
  ],
  "_owner": "alwinw",
  "_selfowned": true,
  "_usedby": 0,
  "_updates": [
    {
      "week": "2025-44",
      "n": 4
    }
  ],
  "_tags": [
    {
      "name": "v1.0.0",
      "date": "2025-10-28"
    }
  ],
  "_topics": [
    "kdigo",
    "kdigo-guidelines",
    "kidney-disease",
    "medical"
  ],
  "_stars": 7,
  "_contributors": [
    {
      "user": "alwinw",
      "count": 290,
      "uuid": 16846521
    },
    {
      "user": "lymt",
      "count": 61,
      "uuid": 66116956
    },
    {
      "user": "olivroy",
      "count": 9,
      "uuid": 52606734
    },
    {
      "user": "davisvaughan",
      "count": 1,
      "uuid": 19150088
    },
    {
      "user": "enchufa2",
      "count": 1,
      "uuid": 4542928
    }
  ],
  "_userbio": {
    "uuid": 16846521,
    "type": "user",
    "name": "Alwin Wang",
    "followers": 94,
    "description": "Full-time aerospace engineer at @Boeing & volunteer honorary data scientist at @AustinMOS Health"
  },
  "_downloads": {
    "count": 373,
    "source": "https://cranlogs.r-pkg.org/downloads/total/last-month/epocakir"
  },
  "_devurl": "https://github.com/alwinw/epocakir",
  "_pkgdown": "https://alwinw.github.io/epocakir/",
  "_searchresults": 11,
  "_rbuild": "4.6.1",
  "_assets": [
    "extra/citation.cff",
    "extra/citation.html",
    "extra/citation.json",
    "extra/citation.txt",
    "extra/contents.json",
    "extra/epocakir.html",
    "extra/manual.pdf",
    "extra/NEWS.html",
    "extra/NEWS.txt",
    "extra/readme.html",
    "extra/readme.md",
    "LICENSE"
  ],
  "_homeurl": "https://github.com/alwinw/epocakir",
  "_realowner": "alwinw",
  "_cranurl": true,
  "_releases": [
    {
      "version": "0.9.7",
      "date": "2021-06-09"
    },
    {
      "version": "0.9.8",
      "date": "2022-05-05"
    },
    {
      "version": "0.9.9",
      "date": "2023-01-06"
    },
    {
      "version": "1.0.0",
      "date": "2025-10-28"
    }
  ],
  "_exports": [
    ".data",
    "%>%",
    "aki_bCr",
    "aki_SCr",
    "aki_stages",
    "aki_staging",
    "aki_UO",
    "Albuminuria_stages",
    "Albuminuria_staging_ACR",
    "Albuminuria_staging_AER",
    "anemia",
    "as_metric",
    "binary2factor",
    "combine_date_time_cols",
    "combn_changes",
    "conversion_factors",
    "dob2age",
    "eGFR",
    "eGFR_adult_SCr",
    "eGFR_adult_SCr_SCysC",
    "eGFR_adult_SCysC",
    "eGFR_child_SCr",
    "eGFR_child_SCr_BUN",
    "eGFR_child_SCysC",
    "GFR_stages",
    "GFR_staging"
  ],
  "_datasets": [
    {
      "name": "aki_pt_data",
      "title": "AKI Patient Data",
      "object": "aki_pt_data",
      "class": [
        "tbl_df",
        "tbl",
        "data.frame"
      ],
      "fields": [
        "SCr_",
        "bCr_",
        "pt_id_",
        "dttm_",
        "UO_",
        "aki_staging_type",
        "aki_"
      ],
      "rows": 27,
      "table": true,
      "tojson": false
    },
    {
      "name": "anemia_pt_data",
      "title": "Anemia Patient Data",
      "object": "anemia_pt_data",
      "class": [
        "tbl_df",
        "tbl",
        "data.frame"
      ],
      "fields": [
        "Hb",
        "age",
        "male"
      ],
      "rows": 10,
      "table": true,
      "tojson": false
    },
    {
      "name": "clinical_obvs",
      "title": "Clinical Patient Data",
      "object": "clinical_obvs",
      "class": [
        "tbl_df",
        "tbl",
        "data.frame"
      ],
      "fields": [
        "Patient Number",
        "Admission Date",
        "Admission Time",
        "Discharge_date",
        "Discharge_time",
        "Date of Birth",
        "Male",
        "Height",
        "Surgery"
      ],
      "rows": 3,
      "table": true,
      "tojson": true
    },
    {
      "name": "eGFR_pt_data",
      "title": "eGFR Patient Data",
      "object": "eGFR_pt_data",
      "class": [
        "tbl_df",
        "tbl",
        "data.frame"
      ],
      "fields": [
        "SCr_",
        "SCysC_",
        "Age_",
        "male_",
        "black_",
        "height_",
        "BUN_",
        "eGFR_calc_type_",
        "eGFR_",
        "pediatric_"
      ],
      "rows": 51,
      "table": true,
      "tojson": false
    }
  ],
  "_help": [
    {
      "page": "aki_bCr",
      "title": "AKI Staging based on Baseline Serum Creatinine",
      "topics": [
        "aki_bCr",
        "aki_bCr.data.frame",
        "aki_bCr.numeric",
        "aki_bCr.units"
      ]
    },
    {
      "page": "aki_pt_data",
      "title": "AKI Patient Data",
      "topics": [
        "aki_pt_data"
      ]
    },
    {
      "page": "aki_SCr",
      "title": "AKI Staging based on Changes in Serum Creatinine",
      "topics": [
        "aki_SCr",
        "aki_SCr.data.frame",
        "aki_SCr.numeric",
        "aki_SCr.units"
      ]
    },
    {
      "page": "aki_stages",
      "title": "AKI Stages",
      "topics": [
        "aki_stages"
      ]
    },
    {
      "page": "aki_staging",
      "title": "Codify AKI from Serum Creatinine and/or Urine Output",
      "topics": [
        "aki_staging",
        "aki_staging.data.frame",
        "aki_staging.numeric",
        "aki_staging.units"
      ]
    },
    {
      "page": "aki_UO",
      "title": "AKI Staging based on Urine Output",
      "topics": [
        "aki_UO",
        "aki_UO.data.frame",
        "aki_UO.numeric",
        "aki_UO.units"
      ]
    },
    {
      "page": "Albuminuria_stages",
      "title": "Albuminuria Stages",
      "topics": [
        "Albuminuria_stages"
      ]
    },
    {
      "page": "Albuminuria_staging_ACR",
      "title": "Albuminuria Staging based on ACR",
      "topics": [
        "Albuminuria_staging_ACR",
        "Albuminuria_staging_ACR.data.frame",
        "Albuminuria_staging_ACR.numeric",
        "Albuminuria_staging_ACR.units"
      ]
    },
    {
      "page": "Albuminuria_staging_AER",
      "title": "Albuminuria Staging based on AER",
      "topics": [
        "Albuminuria_staging_AER",
        "Albuminuria_staging_AER.data.frame",
        "Albuminuria_staging_AER.numeric",
        "Albuminuria_staging_AER.units"
      ]
    },
    {
      "page": "anemia",
      "title": "Diagnosis of anemia from Hb concentration",
      "topics": [
        "anemia",
        "anemia.data.frame",
        "anemia.numeric",
        "anemia.units"
      ]
    },
    {
      "page": "anemia_pt_data",
      "title": "Anemia Patient Data",
      "topics": [
        "anemia_pt_data"
      ]
    },
    {
      "page": "as_metric",
      "title": "Convert a measured value to metric units",
      "topics": [
        "as_metric"
      ]
    },
    {
      "page": "binary2factor",
      "title": "Convert binary data to factors based on column name",
      "topics": [
        "binary2factor"
      ]
    },
    {
      "page": "clinical_obvs",
      "title": "Clinical Patient Data",
      "topics": [
        "clinical_obvs"
      ]
    },
    {
      "page": "combine_date_time_cols",
      "title": "Combine date and time columns into a single DateTime column",
      "topics": [
        "combine_date_time_cols"
      ]
    },
    {
      "page": "combn_changes",
      "title": "Combinatorics changes",
      "topics": [
        "combn_changes",
        "combn_changes.data.frame",
        "combn_changes.POSIXct"
      ]
    },
    {
      "page": "conversion_factors",
      "title": "Conversion Factors",
      "topics": [
        "conversion_factors"
      ]
    },
    {
      "page": "dob2age",
      "title": "Calculate age from DOB",
      "topics": [
        "dob2age"
      ]
    },
    {
      "page": "eGFR",
      "title": "GFR Estimation",
      "topics": [
        "eGFR",
        "eGFR.data.frame",
        "eGFR.numeric",
        "eGFR.units"
      ]
    },
    {
      "page": "eGFR_adult_SCr",
      "title": "eGFR 2009 CKD-EPI creatinine equation",
      "topics": [
        "eGFR_adult_SCr",
        "eGFR_adult_SCr.data.frame",
        "eGFR_adult_SCr.numeric",
        "eGFR_adult_SCr.units"
      ]
    },
    {
      "page": "eGFR_adult_SCr_SCysC",
      "title": "eGFR 2012 CKD-EPI creatinine-cystatin C equation",
      "topics": [
        "eGFR_adult_SCr_SCysC",
        "eGFR_adult_SCr_SCysC.data.frame",
        "eGFR_adult_SCr_SCysC.numeric",
        "eGFR_adult_SCr_SCysC.units"
      ]
    },
    {
      "page": "eGFR_adult_SCysC",
      "title": "eGFR 2012 CKD-EPI cystatin C equation",
      "topics": [
        "eGFR_adult_SCysC",
        "eGFR_adult_SCysC.data.frame",
        "eGFR_adult_SCysC.numeric",
        "eGFR_adult_SCysC.units"
      ]
    },
    {
      "page": "eGFR_child_SCr",
      "title": "eGFR Pediatric SCr and Height",
      "topics": [
        "eGFR_child_SCr",
        "eGFR_child_SCr.data.frame",
        "eGFR_child_SCr.numeric",
        "eGFR_child_SCr.units"
      ]
    },
    {
      "page": "eGFR_child_SCr_BUN",
      "title": "eGFR Pediatric SCr, Height and BUN",
      "topics": [
        "eGFR_child_SCr_BUN",
        "eGFR_child_SCr_BUN.data.frame",
        "eGFR_child_SCr_BUN.numeric",
        "eGFR_child_SCr_BUN.units"
      ]
    },
    {
      "page": "eGFR_child_SCysC",
      "title": "eGFR Pediatric SCysC",
      "topics": [
        "eGFR_child_SCysC",
        "eGFR_child_SCysC.data.frame",
        "eGFR_child_SCysC.numeric",
        "eGFR_child_SCysC.units"
      ]
    },
    {
      "page": "eGFR_pt_data",
      "title": "eGFR Patient Data",
      "topics": [
        "eGFR_pt_data"
      ]
    },
    {
      "page": "GFR_stages",
      "title": "GFR Stages",
      "topics": [
        "GFR_stages"
      ]
    },
    {
      "page": "GFR_staging",
      "title": "GFR Staging",
      "topics": [
        "GFR_staging",
        "GFR_staging.data.frame",
        "GFR_staging.numeric",
        "GFR_staging.units"
      ]
    }
  ],
  "_readme": "https://github.com/alwinw/epocakir/raw/HEAD/README.md",
  "_rundeps": [
    "cli",
    "cpp11",
    "dplyr",
    "generics",
    "glue",
    "lifecycle",
    "lubridate",
    "magrittr",
    "pillar",
    "pkgconfig",
    "purrr",
    "R6",
    "Rcpp",
    "rlang",
    "stringi",
    "stringr",
    "tibble",
    "tidyr",
    "tidyselect",
    "timechange",
    "units",
    "utf8",
    "vctrs",
    "withr"
  ],
  "_vignettes": [
    {
      "source": "epocakir.Rmd",
      "filename": "epocakir.html",
      "title": "Introduction to epocakir",
      "engine": "knitr::rmarkdown",
      "headings": [
        "Introduction",
        "Features",
        "Examples",
        "Clinical Data",
        "AKI Staging",
        "Estimated Glomerular Filtration Rate",
        "Reference"
      ],
      "created": "2021-06-06 07:19:56",
      "modified": "2021-06-06 07:19:56",
      "commits": 1
    }
  ],
  "_score": 5.1875207208364635,
  "_indexed": true,
  "_nocasepkg": "epocakir",
  "_universes": [
    "alwinw"
  ],
  "_binaries": [
    {
      "r": "4.7.0",
      "os": "linux",
      "version": "1.0.0",
      "date": "2026-10-22T07:15:50.000Z",
      "distro": "resolute",
      "commit": "45377a58e1b05ed84734262eee1b3219d408dfab",
      "fileid": "https://r2.ropensci.org/f41519eab5eb71d148b25cac682cb36f1f5cf9dd83e6fd7913c56c3d4a6b3bb5",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/alwinw/actions/runs/39738752905"
    },
    {
      "r": "4.6.1",
      "os": "linux",
      "version": "1.0.0",
      "date": "2026-10-22T07:15:57.000Z",
      "distro": "resolute",
      "commit": "45377a58e1b05ed84734262eee1b3219d408dfab",
      "fileid": "https://r2.ropensci.org/6db1effb2181c4d27153fd2cfbf49aee8707385e38f55751322ffb6289b91e79",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/alwinw/actions/runs/39738752905"
    },
    {
      "r": "4.5.3",
      "os": "mac",
      "version": "1.0.0",
      "date": "2026-10-22T07:16:53.000Z",
      "commit": "45377a58e1b05ed84734262eee1b3219d408dfab",
      "fileid": "https://r2.ropensci.org/dc7e491f4c7ac8db8f4975f2c9521c6456f1441ea0adba1d6810a9be418d10ac",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/alwinw/actions/runs/39738752905"
    },
    {
      "r": "4.6.1",
      "os": "mac",
      "version": "1.0.0",
      "date": "2026-10-22T07:16:35.000Z",
      "commit": "45377a58e1b05ed84734262eee1b3219d408dfab",
      "fileid": "https://r2.ropensci.org/a4f6220b2f84ef9ed1443c55302351f1b7e2d11139c3916646beaa2da50ab361",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/alwinw/actions/runs/39738752905"
    },
    {
      "r": "4.6.0",
      "os": "wasm",
      "version": "1.0.0",
      "date": "2026-10-22T07:16:39.000Z",
      "commit": "45377a58e1b05ed84734262eee1b3219d408dfab",
      "fileid": "https://r2.ropensci.org/656f07717a50e6a6b90293a7d49d7100f0027999ce0e98e6d9361af8f46725aa",
      "status": "success",
      "buildurl": "https://github.com/r-universe/alwinw/actions/runs/39738752905"
    },
    {
      "r": "4.7.0",
      "os": "win",
      "version": "1.0.0",
      "date": "2026-10-22T07:15:08.000Z",
      "commit": "45377a58e1b05ed84734262eee1b3219d408dfab",
      "fileid": "https://r2.ropensci.org/cc1d330d88cb9c11497f5422b4f0d2ef4f82506867cb36c836efa931007b2e89",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/alwinw/actions/runs/39738752905"
    },
    {
      "r": "4.5.3",
      "os": "win",
      "version": "1.0.0",
      "date": "2026-10-22T07:15:17.000Z",
      "commit": "45377a58e1b05ed84734262eee1b3219d408dfab",
      "fileid": "https://r2.ropensci.org/6e38cb2b0b4da7961e43a048e2beeaf9248b6ae3fc5defef3c29b984cf0cb549",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/alwinw/actions/runs/39738752905"
    },
    {
      "r": "4.6.1",
      "os": "win",
      "version": "1.0.0",
      "date": "2026-10-22T07:15:18.000Z",
      "commit": "45377a58e1b05ed84734262eee1b3219d408dfab",
      "fileid": "https://r2.ropensci.org/930bbf7538ce787a8b347195ca284b5ec05aad5fe60e5ff4bdde0c5fd6ac4fb9",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/alwinw/actions/runs/39738752905"
    }
  ]
}